Publications of Carsten Kuenne

Bhagwat, A. M.; Graumann, J.; Wiegandt, R.; Bentsen, M.; Welker, J.; Kuenne, C.; Preussner, J.; Braun, T.; Looso, M.: multicrispr: gRNA design for prime editing and parallel targeting of thousands of targets. LIFE SCIENCE ALLIANCE 3 (11), e202000757 (2020)

Fukuda, R.; Marin-Juez, R.; EI-Sammak, H.; Beisaw, A.; Ramadass, R.; Kuenne, C.; Guenther, S.; Konzer, A.; Bhagwat, A. M.; Graumann, J. et al.; Stainier, D. Y. R.: Stimulation of glycolysis promotes cardiomyocyte proliferation after injury in adult zebrafish. EMBO REPORTS, e49752 (2020)

Beisaw, A.; Kuenne, C.; Guenther, S.; Dallmann, J.; Wu, C.-C.; Bentsen, M.; Looso, M.; Stainier, D. Y. R.: AP-1 Contributes to Chromatin Accessibility to Promote Sarcomere Disassembly and Cardiomyocyte Protrusion During Zebrafish Heart Regeneration. CIRCULATION RESEARCH 126 (12), pp. 1760 - 1778 (2020)

Bensimon-Brito, A.; Ramkumar, S.; Boezio, G. L. M.; Guenther, S.; Kuenne, C.; Helker, C. S. M.; Sanchez-Iranzo, H.; Iloska, D.; Piesker, J.; Pullamsetti, S. et al.; Mercader, N.; Beis, D.; Stainier, D. Y. R.: TGF-beta Signaling Promotes Tissue Formation during Cardiac Valve Regeneration in Adult Zebrafish. DEVELOPMENTAL CELL 52 (1), pp. 9 - + (2020)

Bentsen, M.; Goymann, P.; Schultheis, H.; Klee, K.; Petrova, A.; Wiegandt, R.; Fust, A.; Preussner, J.; Kuenne, C.; Braun, T. et al.; Kim, J.; Looso, M.: ATAC-seq footprinting unravels kinetics of transcription factor binding during zygotic genome activation. NATURE COMMUNICATIONS 11 (1), 4267 (2020)

Fukuda, R.; Marin-Juez, R.; El-Sammak, H.; Beisaw, A.; Ramadass, R.; Kuenne, C.; Guenther, S.; Konzer, A.; Bhagwat, A. M.; Graumann, J. et al.; Stainier, D. Y. R.: Stimulation of glycolysis promotes cardiomyocyte proliferation after injury in adult zebrafish. EMBO REPORTS 21 (8), e49752 (2020)

Sarode, P.; Zheng, X.; Giotopoulou, G. A.; Weigert, A.; Kuenne, C.; Guenther, S.; Friedrich, A.; Gattenloehner, S.; Stiewe, T.; Bruene, B. et al.; Grimminger, F.; Stathopoulos, G. T.; Pullamsetti, S. S.; Seeger, W.; Savai, R.: Reprogramming of tumor-associated macrophages by targeting beta-catenin/FOSL2/ARID5A signaling: A potential treatment of lung cancer. SCIENCE ADVANCES 6 (23), eaaz6105 (2020)

Sreenivasan, K.; Ianni, A.; Kuenne, C.; Strilic, B.; Guenther, S.; Perdiguero, E.; Krueger, M.; Spuler, S.; Offermanns, S.; Gomez-del Arco, P. et al.; Miguel Redondo, J.; Munoz-Canoves, P.; Kim, J.; Braun, T.: Attenuated Epigenetic Suppression of Muscle Stem Cell Necroptosis Is Required for Efficient Regeneration of Dystrophic Muscles. CELL REPORTS 31 (7), UNSP 107652 (2020)

Cencioni, C.; Heid, J.; Krepelova, A.; Rasa, S. M. M.; Kuenne, C.; Guenther, S.; Baumgart, M.; Cellerino, A.; Neri, F.; Spallotta, F. et al.; Gaetano, C.: Aging Triggers H3K27 Trimethylation Hoarding in the Chromatin of Nothobranchius furzeri Skeletal Muscle. CELLS 8 (10), 1169 (2019)

El-Brolosy, M. A.; Kontarakis, Z.; Rossi, A.; Kuenne, C.; Guenther, S.; Fukuda, N.; Kikhi, K.; Boezio, G. L. M.; Takacs, C. M.; Lai, S.-L. et al.; Fukuda, R.; Gerri, C.; Giraldez, A. J.; Stainier, D. Y. R.: Genetic compensation triggered by mutant mRNA degradation. NATURE 568 (7751), pp. 193 - + (2019)

Frickmann, H.; Kuenne, C.; Hagen, R. M.; Podbielski, A.; Normann, J.; Poppert, S.; Looso, M.; Kreikemeyer, B.: Next-generation sequencing for hypothesis-free genomic detection of invasive tropical infections in poly-microbially contaminated, formalin-fixed, paraffin-embedded tissue samples - a proof-of-principle assessment. BMC MICROBIOLOGY 19, 75 (2019)

Gao, R.; Liang, X.; Cheedipudi, S.; Cordero, J.; Jiang, X.; Zhang, Q.; Caputo, L.; Guenther, S.; Kuenne, C.; Ren, Y. et al.; Bhattacharya, S.; Yuan, X.; Barreto, G.; Chen, Y.; Braun, T.; Evans, S. M.; Sun, Y.; Dobreva, G.: Pioneering function of Isl1 in the epigenetic control of cardiomyocyte cell fate. CELL RESEARCH 29 (6), pp. 486 - 501 (2019)

Iring, A.; Jin, Y.-J.; Albarran-Juarez, J.; Siragusa, M.; Wang, S.; Dancs, P. T.; Nakayama, A.; Tonack, S.; Chen, M.; Kuenne, C. et al.; Sokol, A. M.; Guenther, S.; Martinez, A.; Fleming, I.; Wettschureck, N.; Graumann, J.; Weinstein, L. S.; Offermanns, S.: Shear stress-induced endothelial adrenomedullin signaling regulates vascular tone and blood pressure. JOURNAL OF CLINICAL INVESTIGATION 129 (7), pp. 2775 - 2791 (2019)

Lai, J. K. H.; Gagalova, K. K.; Kuenne, C.; El-Brolosy, M. A.; Stainier, D. Y. R.: Induction of interferon-stimulated genes and cellular stress pathways by morpholinos in zebrafish. DEVELOPMENTAL BIOLOGY 454 (1), pp. 21 - 28 (2019)

Marass, M.; Beisaw, A.; Gerri, C.; Luzzani, F.; Fukuda, N.; Gunther, S.; Kuenne, C.; Reischauer, S.; Stainier, D. Y. R.: Genome-wide strategies reveal target genes of Npas4l associated with vascular development in zebrafish. DEVELOPMENT 146 (11), UNSP dev173427 (2019)

Schultheis, H.; Kuenne, C.; Preussner, J.; Wiegandt, R.; Fust, A.; Bentsen, M.; Looso, M.: WIlsON: Web-based Interactive Omics VisualizatioN. BIOINFORMATICS 35 (6), pp. 1055 - 1057 (2019)

Cencioni, C.; Spallotta, F.; Savoia, M.; Kuenne, C.; Guenther, S.; Re, A.; Wingert, S.; Rehage, M.; Sueruen, D.; Siragusa, M. et al.; Smith, J. G.; Schnuetgen, F.; von Melchner, H.; Rieger, M. A.; Martelli, F.; Riccio, A.; Fleming, I.; Braun, T.; Zeiher, A. M.; Farsetti, A.; Gaetano, C.: Zeb1-Hdac2-eNOS circuitry identifies early cardiovascular precursors in naive mouse embryonic stem cells. NATURE COMMUNICATIONS 9, 1281 (2018)

Jia, G.; Preussner, J.; Chen, X.; Guenther, S.; Yuan, X.; Yekelchyk, M.; Kuenne, C.; Looso, M.; Zhou, Y.; Teichmann, S. et al.; Braun, T.: Single cell RNA-seq and ATAC-seq analysis of cardiac progenitor cell transition states and lineage settlement. NATURE COMMUNICATIONS 9, 4877 (2018)

Preussner, J.; Zhong, J.; Sreenivasan, K.; Guenther, S.; Engleitner, T.; Kuenne, C.; Glatzel, M.; Rad, R.; Looso, M.; Braun, T. et al.; Kim, J.: Oncogenic Amplification of Zygotic Dux Factors in Regenerating p53-Deficient Muscle Stem Cells Defines a Molecular Cancer Subtype. CELL STEM CELL 23 (6), pp. 794 - + (2018)

Rasouli, S. J.; El-Brolosy, M.; Tsedeke, A. T.; Bensimon-Brito, A.; Ghanbari, P.; Maischein, H.-M.; Kuenne, C.; Stainier, D. Y.: The flow responsive transcription factor Klf2 is required for myocardial wall integrity by modulating Fgf signaling. ELIFE 7, e38889 (2018)