Publications of Didier Y. R. Stainier

Falcucci, L.; Dooley, C. M.; Adamoski, D.; Juan, T.; Martinez, J.; Georgieva, A. M.; Mamchaoui, K.; Cirzi, C.; Stainier, D. Y. R.: Transcriptional adaptation upregulates utrophin in Duchenne muscular dystrophy. NATURE (639(8054)), pp. 493 - 502 (2025)

Juvik, B.; Falcucci, L.; Lundegaard, P. R.; Stainier, D. Y. R.: A new hypothesis to explain disease dominance. TRENDS IN GENETICS 41 (3), pp. 187 - 193 (2025)

Xu, Y.; Gehlot, R.; Capon, S. J.; Albu, P. M.; Gretz, J.; Bloomekatz, J.; Mattonet, K.; Vucicevic, D.; Talyan, S.; Kikhi, K. et al.; Guenther, S.; Looso, M.; Firulli, B. A.; Sanda, M.; Firulli, A. B.; Lacadie, S. A.; Yelon, D.; Stainier, D. Y. R.: PDGFRA is a conserved HAND2 effector during early cardiac development. NATURE CARDIOVASCULAR RESEARCH 3 (12) (2024)

Prieto-Garcia, C.; Matkovic, V.; Mosler, T.; Li, C.; Liang, J.; Oo, J. A.; Haidle, F.; Macinkovic, I.; Cabrera-Orefice, A.; Berkane, R. et al.; Giuliani, G.; Xu, F.; Jacomin, A.-C.; Tomaskovic, I.; Basoglu, M.; Hoffmann, M. E.; Rathore, R.; Cetin, R.; Boutguetait, D.; Bozkurt, S.; Canas, M. C. H.; Keller, M.; Busam, J.; Shah, V. J.; Wittig, I.; Kaulich, M.; Beli, P.; Galej, W. P.; Ebersberger, I.; Wang, L.; Muench, C.; Stolz, A.; Brandes, R. P.; Tse, W. K. F.; Eimer, S.; Stainier, D. Y. R.; Legewie, S.; Zarnack, K.; Mueller-McNicoll, M.; Dikic, I.: Pathogenic proteotoxicity of cryptic splicing is alleviated by ubiquitination and ER-phagy. SCIENCE 386 (6723), pp. 768 - 776 (2024)

Gentile, A.; Albu, P. M.; Xu, Y.; Mortazavi , N.; da Silva, A.; Stainier, D. Y. R.; Gunawan, F.: Mechanical forces remodel the cardiac extracellular matrix during zebrafish development. DEVELOPMENT 151 (13), dev202310 (2024)

Gauvrit, S.; Zhao, S.; Rothbauer, U.; Stainier, D. Y. R.: A β-catenin chromobody-based probe highlights endothelial maturation during vascular morphogenesis in vivo. DEVELOPMENT 151 (11), dev202122 (2024)

Ribeiro da Silva, A.; Gunawan, F.; Boezio, G. L. M.; Faure , E.; Theron , A.; Avierinos , J.-F.; Lim, S.; Shivam, G. J.; Ramadass, R.; Guenther, S. et al.; Looso, M.; Zaffran, S.; Juan, T.; Stainier, D. Y. R.: egr3 is a mechanosensitive transcription factor gene required for cardiac valve morphogenesis. SCIENCE ADVANCES 10 (20), eadl0633 (2024)

Boezio, G. L. M.; Zhao, S.; Gollin, J.; Priya, R.; Mansingh, S.; Guenther, S.; Fukuda, N.; Gunawan, F.; Stainier, D. Y. R.: The developing epicardium regulates cardiac chamber morphogenesis by promoting cardiomyocyte growth. DISEASE MODELS & MECHANISMS 16 (5), dmm049571 (2023)

Nakajima, H.; Ishikawa, H.; Yamamoto, T.; Chiba, A.; Fukui, H.; Sako, K.; Fukumoto, M.; Mattonet, K.; Kwon, H.-B.; Hui, S. P. et al.; Dobreva, G. D.; Kikuchi, K.; Helker, C. S. M.; Stainier, D. Y. R.; Mochizuki, N.: Endoderm-derived islet1-expressing cells differentiate into endothelial cells to function as the vascular HSPC niche in zebrafish. DEVELOPMENTAL CELL 58 (3), pp. 224 - + (2023)

Jiang, Z.; El-Brolosy, M. A.; Serobyan, V.; Welker, J. M.; Retzer, N.; Dooley, C. M.; Jakutis, G.; Juan, T.; Fukuda, N.; Maischein, H.-M. et al.; Balciunas, D.; Stainier, D. Y. R.: Parental mutations influence wild-type offspring via transcriptional adaptation. SCIENCE ADVANCES 8 (47), eabj2029 (2022)

Mattonet, K.; Riemslagh, F. W.; Guenther, S.; Prummel, K. D.; Kesavan, G.; Hans, S.; Ebersberger, I.; Brand, M.; Burger, A.; Reischauer, S. et al.; Mosimann, C.; Stainier, D. Y. R.: Endothelial versus pronephron fate decision is modulated by the transcription factors Cloche/Npas4l, Tal1, and Lmo2. SCIENCE ADVANCES 8 (35), eabn2082 (2022)

Hu, B.; Lelek, S.; Spanjaard, B.; El-Sammak, H.; Simoes, M. G.; Mintcheva, J.; Aliee, H.; Schaefer, R.; Meyer, A. M.; Theis, F. et al.; Stainier, D. Y. R.; Panakova, D.; Junker, J. P.: Origin and function of activated fibroblast states during zebrafish heart regeneration. NATURE GENETICS (2022)

Yang, Y. H. C.; Briant, L. J. B.; Raab, C. A.; Mullapudi, S. T.; Maischein, H.-M.; Kawakami, K.; Stainier, D. Y. R.:

Innervation modulates the functional connectivity between pancreatic endocrine cells

. ELIFE 11, e64526 (2022)

El-Sammak, H.; Yang, B.; Guenther, S.; Chen, W.; Marin-Juez, R.; Stainier, D. Y. R.: A Vegfc-Emilin2a-Cxcl8a Signaling Axis Required for Zebrafish Cardiac Regeneration. CIRCULATION RESEARCH 130 (7), pp. 1014 - 1029 (2022)

Qi, J.; Rittershaus, A.; Priya, R.; Mansingh, S.; Stainier, D. Y. R.; Helker, C. S. M.; Bautch, V. L.: Apelin signaling dependent endocardial protrusions promote cardiac trabeculation in zebrafish. ELIFE 11, e73231 (2022)

Tarasco, M.; Gavaia, P. J.; Bensimon-Brito, A.; Cardeira-da-Silva, J.; Ramkumar, S.; Cordelieres, F. P.; Guenther, S.; Bebianno, M. J.; Stainier, D. Y. R.; Cancela, M. L. et al.; Laize, V.: New insights into benzo[alpha]pyrene osteotoxicity in zebrafish. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 226, 112838 (2021)

Sarvari, P.; Rasouli, S. J.; Allanki, S.; Stone, O. A.; Sokol, A. M.; Graumann, J.; Stainier, D. Y. R.: The E3 ubiquitin-protein ligase Rbx1 regulates cardiac wall morphogenesis in zebrafish. DEVELOPMENTAL BIOLOGY 480, pp. 1 - 12 (2021)

Ando, K.; Shih, Y.-H.; Ebarasi, L.; Grosse, A.; Portman, D.; Chiba, A.; Mattonet, K.; Gerri, C.; Stainier, D. Y. R.; Mochizuki, N. et al.; Fukuhara, S.; Betsholtz, C.; Lawson, N. D.: Conserved and context-dependent roles for pdgfrb signaling during zebrafish vascular mural cell development. DEVELOPMENTAL BIOLOGY 479, pp. 11 - 22 (2021)

Bensimon-Brito, A.; Boezio, G. L. M.; Cardeira-da-Silva, J.; Wietelmann, A.; Ramkumar, S.; Lundegaard, P. R.; Helker, C. S. M.; Ramadass, R.; Piesker, J.; Nauerth, A. et al.; Mueller, C.; Stainier, D. Y. R.: Integration of multiple imaging platforms to uncover cardiovascular defects in adult zebrafish. CARDIOVASCULAR RESEARCH, cvab310 (2021)

Allanki, S.; Strilic, B.; Scheinberger, L.; Onderwater, Y. L.; Marks, A.; Guenther, S.; Preussner, J.; Kikhi, K.; Looso, M.; Stainier, D. Y. R. et al.; Reischauer, S.: Interleukin-11 signaling promotes cellular reprogramming and limits fibrotic scarring during tissue regeneration. SCIENCE ADVANCES 7 (37), eabg6497 (2021)